Rgraphviz

Provides plotting capabilities for R graph objects

Bioconductor version: Release (2.12)

Interfaces R with the AT and T graphviz library for plotting R graph objects from the graph package.

Author: Jeff Gentry, Li Long, Robert Gentleman, Seth Falcon, Florian Hahne, Deepayan Sarkar, Kasper Daniel Hansen

Maintainer: Kasper Daniel Hansen <khansen at jhsph.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("Rgraphviz")

To cite this package in a publication, start R and enter:

    citation("Rgraphviz")

PDF	R Script	A New Interface to Plot Graphs Using Rgraphviz
PDF	R Script	How To Plot A Graph Using Rgraphviz
PDF		Reference Manual
Text		README
Text		NEWS
Text		LICENSE

biocViews	GraphsAndNetworks, NetworkVisualization, Software
Version	2.4.1
In Bioconductor since	BioC 1.6 (R-1.11) or earlier
License	file LICENSE
Depends	R (>= 2.6.0), methods, utils, graph, grid
Imports	stats4, graph, graphics, grDevices, grid, methods, utils
Suggests	RUnit, BiocGenerics, XML
System Requirements	Graphviz (>= 2.16)
URL
Depends On Me	biocGraph, BioMVCClass, CellNOptR, flowMerge, flowWorkspace, GOFunction, hyperdraw, MineICA, nem, netresponse, pathRender, RchyOptimyx, ROntoTools, SplicingGraphs, TDARACNE
Imports Me	apComplex, biocGraph, DEGraph, GOFunction, nem, pathview, qpgraph, RchyOptimyx, SplicingGraphs
Suggests Me	altcdfenvs, annotate, BiocCaseStudies, Category, CNORfeeder, CNORfuzzy, ddgraph, DEGraph, flowCore, flowMerge, GeneNetworkBuilder, geneplotter, GlobalAncova, globaltest, GOstats, GSEABase, KEGGgraph, MLP, NCIgraph, NCIgraphData, oneChannelGUI, pcaGoPromoter, pkgDepTools, RBGL, RBioinf, rBiopaxParser, RpsiXML, Rtreemix, safe, SNAData, SPIA, SRAdb, Streamer, topGO

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