biocGraph

Graph examples and use cases in Bioinformatics

Bioconductor version: Release (2.12)

This package provides examples and code that make use of the different graph related packages produced by Bioconductor.

Author: Li Long <li.long at isb-sib.ch>, Robert Gentleman <rgentlem at fhcrc.org>, Seth Falcon <sethf at fhcrc.org> Florian Hahne <fhahne at fhcrc.org>

Maintainer: Florian Hahne <florian.hahne at novartis.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("biocGraph")

To cite this package in a publication, start R and enter:

    citation("biocGraph")

Documentation

PDF	R Script	Examples of plotting graphs Using Rgraphviz
PDF	R Script	HOWTO layout pathways
PDF		Reference Manual

Details

biocViews	GraphsAndNetworks, NetworkVisualization, Software
Version	1.22.0
In Bioconductor since	BioC 2.1 (R-2.6)
License	Artistic-2.0
Depends	Rgraphviz, graph
Imports	Rgraphviz, geneplotter, graph, BiocGenerics, methods
Suggests	fibroEset, geneplotter, hgu95av2.db
System Requirements
URL
Depends On Me
Imports Me
Suggests Me	BiocCaseStudies

Package Downloads

Package Source	biocGraph_1.22.0.tar.gz
Windows Binary	biocGraph_1.22.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	biocGraph_1.22.0.tgz
Package Downloads Report	Download Stats

Workflows »

Common Bioconductor workflows include:

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Hosting provided by Fred Hutchinson Cancer Research Center