- Home
- Bioconductor 2.12
- Software Packages
- rBiopaxParser
rBiopaxParser
Parses BioPax files and represents them in R
Bioconductor version: Release (2.12)
Parses BioPAX files and represents them in R, at the moment BioPAX level 2 and level 3 are supported.
Author: Frank Kramer
Maintainer: Frank Kramer <dev at frankkramer.de>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("rBiopaxParser")
To cite this package in a publication, start R and enter:
citation("rBiopaxParser")
Documentation
| biopax2classgraph.pdf | ||
| biopaxsimple.pdf | ||
| mergedpw.pdf | ||
| R Script | rBiopaxParser Vignette | |
| segclock.pdf | ||
| wntplot.pdf | ||
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | Software |
| Version | 1.0.0 |
| In Bioconductor since | BioC 2.13 (R-2.18) |
| License | GPL (>= 2) |
| Depends | |
| Imports | XML |
| Suggests | Rgraphviz, RCurl, graph, RUnit, BiocGenerics |
| System Requirements | |
| URL | https://github.com/frankkramer/rBiopaxParser |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Downloads
| Package Source | rBiopaxParser_1.0.0.tar.gz |
| Windows Binary | rBiopaxParser_1.0.0.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | rBiopaxParser_1.0.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!
Contact us: webmaster@bioconductor.org
Hosting provided by Fred Hutchinson Cancer Research Center
Copyright © 2003 - 2013
