source("http://bioconductor.org/biocLite.R")
biocLite("Rgraphviz")

Rgraphviz

Provides plotting capabilities for R graph objects

Bioconductor version: 2.13

Interfaces R with the AT and T graphviz library for plotting R graph objects from the graph package.

Author: Jeff Gentry, Li Long, Robert Gentleman, Seth Falcon, Florian Hahne, Deepayan Sarkar, Kasper Daniel Hansen

Maintainer: Kasper Daniel Hansen <khansen at jhsph.edu>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("Rgraphviz")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rgraphviz")

 

PDF	R Script	A New Interface to Plot Graphs Using Rgraphviz
PDF	R Script	How To Plot A Graph Using Rgraphviz
PDF		Reference Manual
Text		README
Text		NEWS

Details

biocViews	GraphsAndNetworks, NetworkVisualization, Software
Version	2.6.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier
License	EPL
Depends	R (>= 2.6.0), methods, utils, graph, grid
Imports	stats4, graphics, grDevices
Suggests	RUnit, BiocGenerics, XML
System Requirements	optionally Graphviz (>= 2.16)
URL
Depends On Me	biocGraph, BioMVCClass, CellNOptR, flowMerge, GOFunction, hyperdraw, MineICA, nem, netresponse, paircompviz, pathRender, ROntoTools, SplicingGraphs, TDARACNE
Imports Me	apComplex, biocGraph, DEGraph, flowWorkspace, GOFunction, nem, openCyto, paircompviz, pathview, qpgraph, RchyOptimyx, SplicingGraphs
Suggests Me	altcdfenvs, annotate, BiocCaseStudies, Category, CNORfeeder, CNORfuzzy, ddgraph, DEGraph, flowCore, flowMerge, GeneNetworkBuilder, geneplotter, GlobalAncova, globaltest, GOstats, GSEABase, KEGGgraph, MLP, NCIgraph, NCIgraphData, oneChannelGUI, pcaGoPromoter, pkgDepTools, RBGL, RBioinf, rBiopaxParser, RDAVIDWebService, RpsiXML, Rtreemix, safe, SNAData, SPIA, SRAdb, Streamer, topGO, vtpnet

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	Rgraphviz_2.6.0.tar.gz
Windows Binary	Rgraphviz_2.6.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	Rgraphviz_2.6.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats