source("http://bioconductor.org/biocLite.R")
biocLite("Rtreemix")

Rtreemix

Rtreemix: Mutagenetic trees mixture models.

Bioconductor version: 2.13

Rtreemix is a package that offers an environment for estimating the mutagenetic trees mixture models from cross-sectional data and using them for various predictions. It includes functions for fitting the trees mixture models, likelihood computations, model comparisons, waiting time estimations, stability analysis, etc.

Author: Jasmina Bogojeska

Maintainer: Jasmina Bogojeska <jasmina at mpi-inf.mpg.de>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("Rtreemix")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Rtreemix")

 

PDF		ClassDiagram.pdf
PDF		ExtendedVignette.pdf
PDF	R Script	Rtreemix
PDF		topologies.pdf
PDF		Reference Manual

Details

biocViews	Bioinformatics, Software
Version	1.24.0
In Bioconductor since	BioC 2.2 (R-2.7)
License	LGPL
Depends	R (>= 2.5.0), methods, graph, Biobase
Imports	methods, graph, Biobase, Hmisc
Suggests	Rgraphviz
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	Rtreemix_1.24.0.tar.gz
Windows Binary	Rtreemix_1.24.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	Rtreemix_1.24.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats