source("http://bioconductor.org/biocLite.R")
biocLite("Category")

Category

Category Analysis

Bioconductor version: 2.13

A collection of tools for performing category analysis.

Author: R. Gentleman with contributions from S. Falcon and D.Sarkar

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("Category")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("Category")

 

PDF	R Script	Using Categories to Analyze Microarray Data
PDF	R Script	Using Chromosome Bands as Categories
PDF		Reference Manual
Text		NEWS

Details

biocViews	Annotation, GO, GeneSetEnrichment, Pathways, Software
Version	2.28.0
In Bioconductor since	BioC 1.6 (R-2.1) or earlier
License	Artistic-2.0
Depends	BiocGenerics, AnnotationDbi, Biobase, Matrix, GO.db, methods
Imports	BiocGenerics, graph, methods, Biobase, AnnotationDbi, RBGL, GSEABase(>= 1.19.3), genefilter, annotate(>= 1.15.6), stats, utils
Suggests	EBarrays, ALL, Rgraphviz, RColorBrewer, xtable (>= 1.4-6), hgu95av2.db, KEGG.db, SNPchip, geneplotter, limma, lattice, graph, Biobase, genefilter, methods, RUnit, org.Sc.sgd.db, GOstats
System Requirements
URL
Depends On Me	GOstats, PCpheno, RDAVIDWebService
Imports Me	categoryCompare, cellHTS2, eisa, gCMAP, GOstats, PCpheno, phenoTest, ppiStats, ReportingTools
Suggests Me	BiocCaseStudies, cellHTS, GSEAlm, MmPalateMiRNA

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	Category_2.28.0.tar.gz
Windows Binary	Category_2.28.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	Category_2.28.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats