alabaster.base
Save Bioconductor Objects to File
Bioconductor version: 3.24 · Package version: 1.13.4
Save Bioconductor data structures into file artifacts, and load them back into memory. This is a more robust and portable alternative to serialization of such objects into RDS files. Each artifact is associated with metadata for further interpretation; downstream applications can enrich this metadata with context-specific properties.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("alabaster.base") Details
| Maintainer | Aaron Lun <infinite.monkeys.with.keyboards@gmail.com> |
| Author | Aaron Lun [aut, cre] |
| License | MIT + file LICENSE |
| URL | https://github.com/ArtifactDB/alabaster.base |
| Bug Reports | https://github.com/ArtifactDB/alabaster.base/issues |
| System Requirements | C++17, GNU make |
| Downloads rank | 5434 |
| Source branch | devel |
| biocViews | DataImport, DataRepresentation, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | alabaster.base_1.13.4.tar.gz |
| Windows binary (x86_64) | alabaster.base_1.13.4.zip |
Dependencies
Imports: alabaster.schemas, methods, utils, S4Vectors, rhdf5 (>= 2.47.6), jsonlite, jsonvalidate, Rcpp
LinkingTo: Rcpp, assorthead (>= 1.1.2), Rhdf5lib
Suggests: BiocStyle, rmarkdown, knitr, testthat, digest, Matrix, alabaster.matrix
Reverse dependencies
Depends On Me (12): alabaster, alabaster.bumpy, alabaster.files, alabaster.mae, alabaster.matrix, alabaster.ranges, alabaster.sce, alabaster.se, alabaster.sfe, alabaster.spatial, alabaster.string, alabaster.vcf
Imports Me (4): celldex, chevreulShiny, scRNAseq, SpectraStash
Suggests Me (3): augere.core, MsStash, savingBiocObjects