alabaster.sfe
Language agnostic on disk serialization of SpatialFeatureExperiment
Bioconductor version: 3.24 · Package version: 1.5.0
Builds upon the existing ArtifactDB project, expending alabaster.spatial for language agnostic on disk serialization of SpatialFeatureExperiment.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("alabaster.sfe")Details
| Maintainer | Lambda Moses <dl3764@columbia.edu> |
| Author | Lambda Moses [aut, cre] (ORCID: <https://orcid.org/0000-0002-7092-9427>) |
| License | MIT + file LICENSE |
| URL | https://pachterlab.github.io/alabaster.sfe/ |
| Bug Reports | https://github.com/pachterlab/alabaster.sfe/issues |
| Downloads rank | 173 |
| Source branch | devel |
| biocViews | DataRepresentation, Software, Spatial |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | alabaster.sfe_1.5.0.tar.gz |
| Windows binary (x86_64) | alabaster.sfe_1.5.0.zip |
Dependencies
Depends: R (>= 4.1.0), SpatialFeatureExperiment (>= 1.9.3), alabaster.base
Imports: alabaster.sce, alabaster.spatial (>= 1.5.2), EBImage, jsonlite, methods, RBioFormats, S4Vectors, sfarrow, SingleCellExperiment, spatialreg, spdep, SummarizedExperiment, terra, xml2
Suggests: BiocStyle, fs, knitr, rmarkdown, scater, sf, SFEData, testthat (>= 3.0.0), Voyager (>= 1.9.1)