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ProtGenerics

Generic infrastructure for Bioconductor mass spectrometry packages

Bioconductor version: 3.24 · Package version: 1.45.0

S4 generic functions and classes needed by Bioconductor proteomics packages.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ProtGenerics")

Details

MaintainerLaurent Gatto <laurent.gatto@uclouvain.be>
AuthorLaurent Gatto <laurent.gatto@uclouvain.be>, Johannes Rainer <johannes.rainer@eurac.edu>
LicenseArtistic-2.0
URLhttps://github.com/RforMassSpectrometry/ProtGenerics
Downloads rank12905
Source branchdevel
biocViewsInfrastructure, MassSpectrometry, Proteomics, Software

Download

Follow the installation instructions to use this package in your R session.

Source packageProtGenerics_1.45.0.tar.gz
Windows binary (x86_64)ProtGenerics_1.45.0.zip
macOS binary (arm64)ProtGenerics_1.45.0.tgz
macOS binary (x86_64)ProtGenerics_1.45.0.tgz
Dependencies

Depends: methods

Suggests: testthat

Reverse dependencies

Depends On Me (6): Cardinal, Chromatograms, MetaboAnnotatoR, MsExperiment, SpectraQL, topdownr

Imports Me (25): CompoundDb, ensembldb, matter, MetaboAnnotation, MsBackendMassbank, MsBackendMassIVE, MsBackendMetaboLights, MsBackendMetabolomicsWorkbench, MsBackendMgf, MsBackendMsp, MsBackendRawFileReader, MsBackendSql, MsFeatures, MSnbase, MSnID, MsQuality, MsStash, mzID, mzR, PSMatch, QFeatures, quantMSImageR, Spectra, SpectriPy, xcms