AnVILBase

Generic functions for interacting with the AnVIL ecosystem

Bioconductor version: 3.24 · Package version: 1.7.0

Provides generic functions for interacting with the AnVIL ecosystem. Packages that use either GCP or Azure in AnVIL are built on top of AnVILBase. Extension packages will provide methods for interacting with other cloud providers.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("AnVILBase")

Details

Maintainer	Marcel Ramos <marcel.ramos@sph.cuny.edu>
Author	Marcel Ramos [aut, cre] (ORCID: <https://orcid.org/0000-0002-3242-0582>), Martin Morgan [aut, ctb] (ORCID: <https://orcid.org/0000-0002-5874-8148>), NIH NHGRI U24HG004059 [fnd]
License	Artistic-2.0
URL	https://github.com/Bioconductor/AnVILBase
Bug Reports	https://github.com/Bioconductor/AnVILBase/issues
Downloads rank	771
Source branch	devel
biocViews	Infrastructure, Software

Documentation

Introduction to AnVILBase

Download

Follow the installation instructions to use this package in your R session.

Source package	AnVILBase_1.7.0.tar.gz
Windows binary (x86_64)	AnVILBase_1.7.0.zip
macOS binary (arm64)	AnVILBase_1.7.0.tgz
macOS binary (x86_64)	AnVILBase_1.7.0.tgz

Dependencies

Depends: R (>= 4.5.0)

Imports: httr, httr2, dplyr, jsonlite, methods, tibble

Suggests: AnVIL, AnVILAz, AnVILGCP, BiocStyle, GCPtools, knitr, rmarkdown, testthat (>= 3.0.0), tinytest

Reverse dependencies

Depends On Me (2): AnVIL, AnVILWorkflow

Imports Me (3): AnVILAz, AnVILGCP, GCPtools

Suggests Me (3): AnVILPublish, AnVILVRS, terraTCGAdata