AnVILPublish
Publish Packages and Other Resources to AnVIL Workspaces
Bioconductor version: 3.24 · Package version: 1.23.5
Use this package to create or update AnVIL workspaces from resources such as R / Bioconductor packages. The metadata about the package (e.g., select information from the package DESCRIPTION file and from vignette YAML headings) are used to populate the 'DASHBOARD'. Vignettes are translated to python notebooks ready for evaluation in AnVIL.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("AnVILPublish")Details
| Maintainer | Marcel Ramos <marcel.ramos@sph.cuny.edu> |
| Author | Marcel Ramos [aut, cre] (ORCID: <https://orcid.org/0000-0002-3242-0582>), Martin Morgan [aut] (ORCID: <https://orcid.org/0000-0002-5874-8148>), Kayla Interdonato [aut], Vincent Carey [ctb] (ORCID: <https://orcid.org/0000-0003-4046-0063>), NHGRI [fnd] (GrantNo.: U24HG010263) |
| License | Artistic-2.0 |
| URL | https://github.com/Bioconductor/AnVILPublish/ |
| Bug Reports | https://github.com/Bioconductor/AnVILPublish/issues |
| System Requirements | Quarto command line tool (<https://github.com/quarto-dev/quarto-cli>) |
| Downloads rank | 325 |
| Source branch | devel |
| biocViews | Infrastructure, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | AnVILPublish_1.23.5.tar.gz |
| Windows binary (x86_64) | AnVILPublish_1.23.5.zip |
| macOS binary (arm64) | AnVILPublish_1.23.5.tgz |
| macOS binary (x86_64) | AnVILPublish_1.23.5.tgz |
Dependencies
Imports: AnVIL, AnVILGCP, BiocBaseUtils, BiocManager, httr, jsonlite, rmarkdown, yaml, readr, whisker, tools, utils, stats
Suggests: AnVILBase, knitr, BiocStyle, GCPtools, testthat (>= 3.0.0)
Reverse dependencies
Imports Me (1): BiocAzul