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illuminaio

Parsing Illumina Microarray Output Files

Bioconductor version: 3.24 · Package version: 0.55.0

Tools for parsing Illumina's microarray output files, including IDAT.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("illuminaio")

Details

MaintainerKasper Daniel Hansen <kasperdanielhansen@gmail.com>
AuthorKeith Baggerly [aut], Henrik Bengtsson [aut], Kasper Daniel Hansen [aut, cre], Matt Ritchie [aut], Mike L. Smith [aut], Tim Triche Jr. [ctb]
LicenseGPL-2
URLhttps://github.com/HenrikBengtsson/illuminaio
Bug Reportshttps://github.com/HenrikBengtsson/illuminaio/issues
Downloads rank3812
Source branchdevel
biocViewsDataImport, Infrastructure, Microarray, ProprietaryPlatforms, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageilluminaio_0.55.0.tar.gz
Windows binary (x86_64)illuminaio_0.55.0.zip
macOS binary (arm64)illuminaio_0.55.0.tgz
macOS binary (x86_64)illuminaio_0.55.0.tgz
Dependencies

Imports: base64

Suggests: RUnit, BiocGenerics, IlluminaDataTestFiles (>= 1.0.2), BiocStyle

Reverse dependencies

Depends On Me (4): EGSEA123, normalize450K, RnBeads, wateRmelon

Imports Me (6): bigmelon, ChAMP, crlmm, ENmix, methylumi, minfi

Suggests Me (1): limma