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affyio

Tools for parsing Affymetrix data files

Bioconductor version: 3.23 · Package version: 1.82.0

Routines for parsing Affymetrix data files based upon file format information. Primary focus is on accessing the CEL and CDF file formats.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("affyio")

Details

MaintainerBen Bolstad <bmb@bmbolstad.com>
AuthorBen Bolstad <bmb@bmbolstad.com>
LicenseLGPL (>= 2)
URLhttps://github.com/bmbolstad/affyio
Downloads rank9915
Source branchRELEASE_3_23
biocViewsDataImport, Infrastructure, Microarray, Software

Download

Follow the installation instructions to use this package in your R session.

Source packageaffyio_1.82.0.tar.gz
Windows binary (x86_64)affyio_1.82.0.zip
macOS binary (arm64)affyio_1.82.0.tgz
macOS binary (x86_64)affyio_1.82.0.tgz
Dependencies

Depends: R (>= 2.6.0)

Imports: methods

Reverse dependencies

Depends On Me (2): makecdfenv, SCAN.UPC

Imports Me (8): affy, affylmGUI, crlmm, ExiMiR, gcrma, oligo, oligoClasses, puma

Suggests Me (1): BufferedMatrixMethods