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affylmGUI

GUI for limma Package with Affymetrix Microarrays

Bioconductor version: 3.23 · Package version: 1.86.0

A Graphical User Interface (GUI) for analysis of Affymetrix microarray gene expression data using the affy and limma packages.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("affylmGUI")

Details

MaintainerGordon Smyth <smyth@wehi.edu.au>
AuthorJames Wettenhall [cre,aut], Gordon Smyth [aut], Ken Simpson [aut], Keith Satterley [ctb]
LicenseGPL (>=2)
URLhttp://bioinf.wehi.edu.au/affylmGUI/
Downloads rank760
Source branchRELEASE_3_23
biocViewsBatchEffect, Bayesian, DataImport, DifferentialExpression, GUI, GeneExpression, Microarray, MultipleComparison, Normalization, OneChannel, Preprocessing, ProprietaryPlatforms, QualityControl, Regression, Software, TimeCourse, Transcription, mRNAMicroarray

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageaffylmGUI_1.86.0.tar.gz
Windows binary (x86_64)affylmGUI_1.86.0.zip
macOS binary (arm64)affylmGUI_1.86.0.tgz
macOS binary (x86_64)affylmGUI_1.86.0.tgz
Dependencies

Imports: grDevices, graphics, stats, utils, tcltk, tkrplot, limma, affy, affyio, affyPLM, gcrma, BiocGenerics, AnnotationDbi, BiocManager, R2HTML, xtable