CGHnormaliter
Normalization of array CGH data with imbalanced aberrations.
Bioconductor version: 3.23 · Package version: 1.66.0
Normalization and centralization of array comparative genomic hybridization (aCGH) data. The algorithm uses an iterative procedure that effectively eliminates the influence of imbalanced copy numbers. This leads to a more reliable assessment of copy number alterations (CNAs).
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("CGHnormaliter")Details
| Maintainer | Bart P.P. van Houte <bvhoute@few.vu.nl> |
| Author | Bart P.P. van Houte, Thomas W. Binsl, Hannes Hettling |
| License | GPL (>= 3) |
| Downloads rank | 546 |
| Source branch | RELEASE_3_23 |
| biocViews | Microarray, Preprocessing, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | CGHnormaliter_1.66.0.tar.gz |
| Windows binary (x86_64) | CGHnormaliter_1.66.0.zip |
| macOS binary (arm64) | CGHnormaliter_1.66.0.tgz |
| macOS binary (x86_64) | CGHnormaliter_1.66.0.tgz |
Dependencies
Depends: CGHcall (>= 2.17.0), CGHbase (>= 1.15.0)