source("http://bioconductor.org/biocLite.R")
biocLite("msmsEDA")

msmsEDA

Exploratory Data Analysis of LC-MS/MS data by spectral counts

Bioconductor version: 2.13

Exploratory data analysis to assess the quality of a set of LC-MS/MS experiments, and visualize de influence of the involved factors.

Author: Josep Gregori, Alex Sanchez, and Josep Villanueva

Maintainer: Josep Gregori <josep.gregori at gmail.com>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("msmsEDA")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("msmsEDA")

 

PDF	R Script	msmsEDA: Batch effects detection in LC-MSMS experiments
PDF		Reference Manual

Details

biocViews	MassSpectrometry, Proteomics, Software
Version	1.0.0
In Bioconductor since	BioC 2.13 (R-3.0)
License	GPL-2
Depends	R (>= 3.0.1), MSnbase
Imports	MASS, gplots, RColorBrewer
Suggests
System Requirements
URL
Depends On Me	msmsTests
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	msmsEDA_1.0.0.tar.gz
Windows Binary	msmsEDA_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	msmsEDA_1.0.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats