msmsEDA-package |
Exploratory Data Analysis of label-free LC-MS/MS spectral counts |
count.stats |
Summary of statistics of spectral counts by sample in the dataset |
counts.hc |
Hierarchical clustering on an spectral counts matrix. |
counts.heatmap |
Heatmap of an spectral counts matrix. |
counts.pca |
Principal components analysis of an spectral counts matrix. |
disp.estimates |
Residual dispersion estimates |
gene.table |
Gene symbols associated to protein accessions |
msms.dataset |
LC-MS/MS dataset |
msmsEDA |
Exploratory Data Analysis of label-free LC-MS/MS spectral counts |
norm.counts |
Spectral counts matrix normalization |
pnms |
Accessions and gene symbols |
pp.msms.data |
Spectral counts matrix pre-processing |