rsbml
R support for SBML, using libsbml
Bioconductor version: Release (2.12)
Links R to libsbml for SBML parsing, validating output, provides an S4 SBML DOM, converts SBML to R graph objects. Optionally links to the SBML ODE Solver Library (SOSLib) for simulating models.
Author: Michael Lawrence <michafla at gene.com>
Maintainer: Michael Lawrence <michafla at gene.com>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("rsbml")
To cite this package in a publication, start R and enter:
citation("rsbml")
Documentation
| R Script | Quick start for rsbml | |
| Reference Manual | ||
| Text | NEWS |
Details
| biocViews | GraphsAndNetworks, NetworkAnalysis, Pathways, Software |
| Version | 2.18.1 |
| In Bioconductor since | BioC 2.1 (R-2.6) |
| License | Artistic-2.0 |
| Depends | R (>= 2.6.0), BiocGenerics(>= 0.3.2), methods, utils |
| Imports | BiocGenerics, graph, utils |
| Suggests | |
| System Requirements | libsbml (>=3.0.3) |
| URL | http://www.sbml.org |
| Depends On Me | |
| Imports Me | |
| Suggests Me | piano |
Package Downloads
| Package Source | rsbml_2.18.1.tar.gz |
| Windows Binary | rsbml_2.18.1.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | rsbml_2.18.1.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!
Contact us: webmaster@bioconductor.org
Hosting provided by Fred Hutchinson Cancer Research Center
Copyright © 2003 - 2013
