shinyMethyl
Interactive visualization for Illumina methylation arrays
Bioconductor version: 3.23 · Package version: 1.48.0
Interactive tool for visualizing Illumina methylation array data. Both the 450k and EPIC array are supported.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("shinyMethyl")Details
| Maintainer | Jean-Philippe Fortin <fortin946@gmail.com> |
| Author | Jean-Philippe Fortin [cre, aut], Kasper Daniel Hansen [aut] |
| License | Artistic-2.0 |
| URL | https://github.com/Jfortin1/shinyMethyl |
| Bug Reports | https://github.com/Jfortin1/shinyMethyl |
| Downloads rank | 647 |
| Source branch | RELEASE_3_23 |
| biocViews | DNAMethylation, MethylationArray, Microarray, Preprocessing, QualityControl, Software, TwoChannel |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | shinyMethyl_1.48.0.tar.gz |
| Windows binary (x86_64) | shinyMethyl_1.48.0.zip |
| macOS binary (arm64) | shinyMethyl_1.48.0.tgz |
| macOS binary (x86_64) | shinyMethyl_1.48.0.tgz |
Dependencies
Imports: Biobase, BiocGenerics, graphics, grDevices, htmltools, MatrixGenerics, methods, minfi, RColorBrewer, shiny, stats, utils
Suggests: shinyMethylData, minfiData, BiocStyle, knitr, testthat