pandaR
PANDA Algorithm
Bioconductor version: 3.23 · Package version: 1.44.0
Runs PANDA, an algorithm for discovering novel network structure by combining information from multiple complementary data sources.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("pandaR")Details
| Maintainer | Joseph N. Paulson <paulson.joseph@gene.com>, Dan Schlauch <dschlauch@genospace.com> |
| Author | Dan Schlauch, Joseph N. Paulson, Albert Young, John Quackenbush, Kimberly Glass |
| License | GPL-2 |
| Downloads rank | 594 |
| Source branch | RELEASE_3_23 |
| biocViews | GeneExpression, GeneRegulation, GraphAndNetwork, Microarray, Network, NetworkInference, Software, StatisticalMethod, Transcription |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | pandaR_1.44.0.tar.gz |
| Windows binary (x86_64) | pandaR_1.43.0.zip |
| macOS binary (arm64) | pandaR_1.44.0.tgz |
| macOS binary (x86_64) | pandaR_1.44.0.tgz |
Dependencies
Depends: R (>= 3.0.0), methods, Biobase, BiocGenerics
Imports: matrixStats, igraph, ggplot2, grid, reshape, plyr, RUnit, hexbin
Reverse dependencies
Depends On Me (1): netZooR