TPP
Analyze thermal proteome profiling (TPP) experiments
Bioconductor version: 3.23 · Package version: 3.40.2
Analyze thermal proteome profiling (TPP) experiments with varying temperatures (TR) or compound concentrations (CCR).
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("TPP")Details
| Maintainer | Dorothee Childs <d.childs@posteo.de> |
| Author | Dorothee Childs [cre, aut], Nils Kurzawa [aut], Holger Franken [aut], Carola Doce [aut], Mikhail Savitski [aut], Wolfgang Huber [aut] |
| License | Artistic-2.0 |
| Downloads rank | 716 |
| Source branch | RELEASE_3_23 |
| biocViews | ImmunoOncology, MassSpectrometry, Proteomics, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | TPP_3.40.2.tar.gz |
| Windows binary (x86_64) | TPP_3.40.2.zip |
| macOS binary (arm64) | TPP_3.40.2.tgz |
| macOS binary (x86_64) | TPP_3.40.2.tgz |
Dependencies
Depends: R (>= 3.4), Biobase, dplyr, magrittr, tidyr
Imports: data.table, doParallel, foreach, futile.logger, ggplot2, grDevices, gridExtra, grid, knitr, limma, MASS, nls2, openxlsx (>= 2.4.0), parallel, plyr, purrr, RColorBrewer, RCurl, reshape2, rlang, rmarkdown, splines, stats, stringr, tibble, utils, VennDiagram, VGAM
Reverse dependencies
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