MiRaGE
MiRNA Ranking by Gene Expression
Bioconductor version: 3.23 · Package version: 1.54.0
The package contains functions for inferece of target gene regulation by miRNA, based on only target gene expression profile.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("MiRaGE")Details
| Maintainer | Y-h. Taguchi <tag@granular.com> |
| Author | Y-h. Taguchi <tag@granular.com> |
| License | GPL |
| Downloads rank | 742 |
| Source branch | RELEASE_3_23 |
| biocViews | GeneExpression, ImmunoOncology, Microarray, RNASeq, SAGE, Sequencing, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | MiRaGE_1.54.0.tar.gz |
| Windows binary (x86_64) | MiRaGE_1.54.0.zip |
| macOS binary (arm64) | MiRaGE_1.54.0.tgz |
| macOS binary (x86_64) | MiRaGE_1.54.0.tgz |
Dependencies
Depends: R (>= 3.1.0), Biobase (>= 2.23.3)
Imports: BiocGenerics, S4Vectors, AnnotationDbi, BiocManager
Suggests: seqinr (>= 3.0.7), biomaRt (>= 2.19.1), GenomicFeatures (>= 1.15.4), Biostrings (>= 2.31.3), BSgenome.Hsapiens.UCSC.hg19, BSgenome.Mmusculus.UCSC.mm10, miRNATarget, humanStemCell, IRanges, GenomicRanges (>= 1.8.3), BSgenome, beadarrayExampleData