FISHalyseR
FISHalyseR a package for automated FISH quantification
Bioconductor version: 3.23 · Package version: 1.46.0
FISHalyseR provides functionality to process and analyse digital cell culture images, in particular to quantify FISH probes within nuclei. Furthermore, it extract the spatial location of each nucleus as well as each probe enabling spatial co-localisation analysis.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("FISHalyseR")Details
| Maintainer | Karesh Arunakirinathan <akaresh88@gmail.com>, Andreas Heindl <andreas.heindl@icr.ac.uk> |
| Author | Karesh Arunakirinathan <akaresh88@gmail.com>, Andreas Heindl <andreas.heindl@icr.ac.uk> |
| License | Artistic-2.0 |
| Downloads rank | 382 |
| Source branch | RELEASE_3_23 |
| biocViews | CellBiology, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | FISHalyseR_1.46.0.tar.gz |
| Windows binary (x86_64) | FISHalyseR_1.46.0.zip |
| macOS binary (arm64) | FISHalyseR_1.46.0.tgz |
| macOS binary (x86_64) | FISHalyseR_1.46.0.tgz |