ACE
Absolute Copy Number Estimation from Low-coverage Whole Genome Sequencing
Bioconductor version: 3.23 · Package version: 1.30.0
Uses segmented copy number data to estimate tumor cell percentage and produce copy number plots displaying absolute copy numbers.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ACE")Details
| Maintainer | Jos B Poell <j.poell@amsterdamumc.nl> |
| Author | Jos B Poell |
| License | GPL-2 |
| URL | https://github.com/tgac-vumc/ACE |
| Downloads rank | 507 |
| Source branch | RELEASE_3_23 |
| biocViews | CopyNumberVariation, Coverage, DNASeq, Sequencing, Software, Visualization, WholeGenome |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | ACE_1.30.0.tar.gz |
| Windows binary (x86_64) | ACE_1.30.0.zip |
| macOS binary (arm64) | ACE_1.30.0.tgz |
| macOS binary (x86_64) | ACE_1.30.0.tgz |