scTHI

Indentification of significantly activated ligand-receptor interactions across clusters of cells from single-cell RNA sequencing data

Bioconductor version: 3.24 · Package version: 1.25.0

scTHI is an R package to identify active pairs of ligand-receptors from single cells in order to study,among others, tumor-host interactions. scTHI contains a set of signatures to classify cells from the tumor microenvironment.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("scTHI")