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makecdfenv

CDF Environment Maker

Bioconductor version: 3.24 · Package version: 1.89.0

This package has two functions. One reads a Affymetrix chip description file (CDF) and creates a hash table environment containing the location/probe set membership mapping. The other creates a package that automatically loads that environment.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("makecdfenv")

Details

MaintainerJames W. MacDonald <jmacdon@u.washington.edu>
AuthorRafael A. Irizarry <rafa@jhu.edu>, Laurent Gautier <laurent@cbs.dtu.dk>, Wolfgang Huber <w.huber@dkfz-heidelberg.de>, Ben Bolstad <bmb@bmbolstad.com>
LicenseGPL (>= 2)
Downloads rank835
Source branchdevel
biocViewsDataImport, OneChannel, Preprocessing, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packagemakecdfenv_1.89.0.tar.gz
Windows binary (x86_64)makecdfenv_1.89.0.zip
macOS binary (arm64)makecdfenv_1.89.0.tgz
macOS binary (x86_64)makecdfenv_1.89.0.tgz
Dependencies

Depends: R (>= 2.6.0), affyio

Imports: Biobase, affy, methods, stats, utils

Reverse dependencies

Depends On Me (1): altcdfenvs