dagLogo
dagLogo: a Bioconductor package for visualizing conserved amino acid sequence pattern in groups based on probability theory
Bioconductor version: 3.24 · Package version: 1.51.0
Visualize significant conserved amino acid sequence pattern in groups based on probability theory.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("dagLogo")Details
| Maintainer | Jianhong Ou <jou@morgridge.org> |
| Author | Jianhong Ou, Haibo Liu, Alexey Stukalov, Niraj Nirala, Usha Acharya, Lihua Julie Zhu |
| License | GPL (>=2) |
| Downloads rank | 701 |
| Source branch | devel |
| biocViews | SequenceMatching, Software, Visualization |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | dagLogo_1.51.0.tar.gz |
| Windows binary (x86_64) | dagLogo_1.51.0.zip |
| macOS binary (arm64) | dagLogo_1.51.0.tgz |
| macOS binary (x86_64) | dagLogo_1.51.0.tgz |
Dependencies
Depends: R (>= 3.0.1), methods, grid
Imports: pheatmap, Biostrings, UniProt.ws, BiocGenerics, utils, biomaRt, motifStack, httr
Suggests: XML, grImport, grImport2, BiocStyle, knitr, rmarkdown, testthat