ROTS
Reproducibility-Optimized Test Statistic
Bioconductor version: 3.24 · Package version: 2.5.1
Calculates the Reproducibility-Optimized Test Statistic (ROTS) for differential testing in omics data.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ROTS")Details
| Maintainer | Tomi Suomi <tomi.suomi@utu.fi> |
| Author | Fatemeh Seyednasrollah, Tomi Suomi, Laura L. Elo |
| License | GPL (>= 2) |
| Downloads rank | 674 |
| Source branch | devel |
| biocViews | DifferentialExpression, GeneExpression, ImmunoOncology, Microarray, Proteomics, RNASeq, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | ROTS_2.5.1.tar.gz |
| Windows binary (x86_64) | ROTS_2.5.1.zip |
| macOS binary (arm64) | ROTS_2.5.1.tgz |
| macOS binary (x86_64) | ROTS_2.5.1.tgz |
Dependencies
Depends: R (>= 3.6)
Imports: Rcpp, stats, Biobase, methods, BiocParallel, lme4, survival
LinkingTo: Rcpp
Suggests: testthat