MBASED

Package containing functions for ASE analysis using Meta-analysis Based Allele-Specific Expression Detection

Bioconductor version: 3.24 · Package version: 1.47.0

The package implements MBASED algorithm for detecting allele-specific gene expression from RNA count data, where allele counts at individual loci (SNVs) are integrated into a gene-specific measure of ASE, and utilizes simulations to appropriately assess the statistical significance of observed ASE.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("MBASED")