erma

DOI: 10.18129/B9.bioc.erma    

This package is for version 3.8 of Bioconductor; for the stable, up-to-date release version, see erma.

epigenomic road map adventures

Bioconductor version: 3.8

Software and data to support epigenomic road map adventures.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Installation

To install this package, start R (version "3.5") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")
BiocManager::install("erma")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("erma")

 

HTML	R Script	ermaInteractive
PDF		Reference Manual

Details

biocViews	Software
Version	0.14.0
In Bioconductor since	BioC 3.2 (R-3.2) (3.5 years)
License	Artistic-2.0
Depends	R (>= 3.1), methods, Homo.sapiens, GenomicFiles(>= 1.5.2)
Imports	rtracklayer(>= 1.38.1), S4Vectors, BiocGenerics, GenomicRanges, SummarizedExperiment, ggplot2, GenomeInfoDb, Biobase, shiny, BiocParallel, IRanges, AnnotationDbi
LinkingTo
Suggests	rmarkdown, BiocStyle, knitr, GO.db, png, DT, doParallel
SystemRequirements
Enhances
URL
Depends On Me
Imports Me	gQTLstats, ldblock
Suggests Me	gQTLBase, yriMulti
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	erma_0.14.0.tar.gz
Windows Binary	erma_0.14.0.zip
Mac OS X 10.11 (El Capitan)	erma_0.14.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/erma
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/erma
Package Short Url	http://bioconductor.org/packages/erma/
Package Downloads Report	Download Stats