FlowSorted.Blood.450k

Illumina HumanMethylation Data on Sorted Blood Cell Populations

Bioconductor version: 3.24 · Package version: 1.51.2

Provides functions to download (and cache locally via BiocFileCache) data objects for the Illumina 450k DNA methylation microarrays, and an object depicting which CpGs on the array are associated with cell type. The underlying data is hosted on Zenodo.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("FlowSorted.Blood.450k")

Details

Maintainer	Andrew E Jaffe <andrewejaffe@gmail.com>
Author	Andrew E Jaffe [aut, cre]
License	Artistic-2.0
Downloads rank	494
Source branch	devel
biocViews	ExperimentData, Homo_sapiens_Data, MethylationArrayData, MicroarrayData, Tissue, TissueMicroarrayData

Download

Follow the installation instructions to use this package in your R session.

Source package

FlowSorted.Blood.450k_1.51.2.tar.gz

Dependencies

Depends: R (>= 4.0.0), minfi (>= 1.21.2)

Imports: BiocFileCache, tools

Reverse dependencies

Depends On Me (2): methylationArrayAnalysis, methylCC

Suggests Me (5): dnaEPICO, FlowSorted.Blood.EPIC, mCSEA, minfi, wateRmelon