scds
In-Silico Annotation of Doublets for Single Cell RNA Sequencing Data
Bioconductor version: 3.24 · Package version: 2.1.0
In single cell RNA sequencing (scRNA-seq) data combinations of cells are sometimes considered a single cell (doublets). The scds package provides methods to annotate doublets in scRNA-seq data computationally.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("scds")Details
| Maintainer | Dennis Kostka <kostka@pitt.edu> |
| Author | Dennis Kostka [aut, cre], Bais Abha [aut] |
| License | MIT + file LICENSE |
| Downloads rank | 1182 |
| Source branch | devel |
| biocViews | Classification, GeneExpression, Preprocessing, QualityControl, RNASeq, Sequencing, SingleCell, Software, Transcriptomics |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | scds_2.1.0.tar.gz |
| Windows binary (x86_64) | scds_2.1.0.zip |
| macOS binary (arm64) | scds_2.1.0.tgz |
| macOS binary (x86_64) | scds_2.1.0.tgz |