Package: scds
Type: Package
Title: In-Silico Annotation of Doublets for Single Cell RNA Sequencing
        Data
Version: 2.1.0
Authors@R: c(person("Dennis", "Kostka", role=c("aut", "cre"),
        email="kostka@pitt.edu"), person("Bais", "Abha",
        role=c("aut"), email="abhabais@pitt.edu"))
Description: In single cell RNA sequencing (scRNA-seq) data
        combinations of cells are sometimes considered a single cell
        (doublets). The scds package provides methods to annotate
        doublets in scRNA-seq data computationally.
License: MIT + file LICENSE
Encoding: UTF-8
biocViews: SingleCell, RNASeq, QualityControl, Preprocessing,
        Transcriptomics, GeneExpression, Sequencing, Software,
        Classification
RoxygenNote: 7.3.3
Depends: R (>= 3.6.0)
Imports: Matrix, S4Vectors, SingleCellExperiment, SummarizedExperiment,
        xgboost, methods, stats, dplyr, pROC
Suggests: BiocStyle, knitr, rsvd, Rtsne, scater, cowplot, rmarkdown
VignetteBuilder: knitr
Config/pak/sysreqs: make zlib1g-dev
Repository: https://bioc.r-universe.dev
Date/Publication: 2026-04-28 12:49:39 UTC
RemoteUrl: https://github.com/bioc/scds
RemoteRef: HEAD
RemoteSha: 731410b2fdae6c05fba5f0c94659d2ef299e66e1
NeedsCompilation: no
Packaged: 2026-05-11 10:08:30 UTC; root
Author: Dennis Kostka [aut, cre],
  Bais Abha [aut]
Maintainer: Dennis Kostka <kostka@pitt.edu>
Built: R 4.6.0; ; 2026-05-11 10:14:27 UTC; unix
