SCnorm
Normalization of single cell RNA-seq data
Bioconductor version: 3.24 · Package version: 1.35.0
This package implements SCnorm — a method to normalize single-cell RNA-seq data.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("SCnorm")Details
| Maintainer | Rhonda Bacher <rbacher@ufl.edu> |
| Author | Rhonda Bacher |
| License | GPL (>= 2) |
| URL | https://github.com/rhondabacher/SCnorm |
| Bug Reports | https://github.com/rhondabacher/SCnorm/issues |
| Downloads rank | 620 |
| Source branch | devel |
| biocViews | ImmunoOncology, Normalization, RNASeq, SingleCell, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | SCnorm_1.35.0.tar.gz |
| Windows binary (x86_64) | SCnorm_1.35.0.zip |
| macOS binary (arm64) | SCnorm_1.35.0.tgz |
| macOS binary (x86_64) | SCnorm_1.35.0.tgz |
Dependencies
Depends: R (>= 3.4.0)
Imports: SingleCellExperiment, SummarizedExperiment, stats, methods, graphics, grDevices, parallel, quantreg, cluster, moments, data.table, BiocParallel, S4Vectors, ggplot2, forcats, BiocGenerics