Rbwa
R wrapper for BWA-backtrack and BWA-MEM aligners
Bioconductor version: 3.24 · Package version: 1.17.0
Provides an R wrapper for BWA alignment algorithms. Both BWA-backtrack and BWA-MEM are available. Convenience function to build a BWA index from a reference genome is also provided. Currently not supported for Windows machines.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("Rbwa")Details
| Maintainer | Jean-Philippe Fortin <fortin946@gmail.com> |
| Author | Jean-Philippe Fortin [aut, cre] |
| License | MIT + file LICENSE |
| URL | https://github.com/Jfortin1/Rbwa |
| Bug Reports | https://github.com/crisprVerse/Rbwa/issues |
| System Requirements | GNU make |
| Downloads rank | 265 |
| Source branch | devel |
| biocViews | Alignment, Sequencing, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | Rbwa_1.17.0.tar.gz |
| macOS binary (arm64) | Rbwa_1.17.0.tgz |
| macOS binary (x86_64) | Rbwa_1.17.0.tgz |