ClusterFoldSimilarity

Calculate similarity of clusters from different single cell samples using foldchanges

Bioconductor version: 3.24 · Package version: 1.9.0

This package calculates a similarity coefficient using the fold changes of shared features (e.g. genes) among clusters of different samples/batches/datasets. The similarity coefficient is calculated using the dot-product (Hadamard product) of every pairwise combination of Fold Changes between a source cluster i of sample/dataset n and all the target clusters j in sample/dataset m

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("ClusterFoldSimilarity")