BSgenome.Mmusculus.UCSC.mm9

Full genome sequences for Mus musculus (UCSC version mm9)

Bioconductor version: 3.23 · Package version: 1.4.0

Full genome sequences for Mus musculus (Mouse) as provided by UCSC (mm9, Jul. 2007) and stored in Biostrings objects.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("BSgenome.Mmusculus.UCSC.mm9")

Maintainer	Bioconductor Package Maintainer <maintainer@bioconductor.org>
Author	The Bioconductor Dev Team
License	Artistic-2.0
Downloads rank	327
Source branch	RELEASE_3_23
biocViews	AnnotationData, BSgenome, Genetics, Mus_musculus

Follow the installation instructions to use this package in your R session.

Source package

Dependencies

Depends: BSgenome (>= 1.33.5)

Imports: BSgenome

Suggests: TxDb.Mmusculus.UCSC.mm9.knownGene

Reverse dependencies

Depends On Me (1): BSgenome.Mmusculus.UCSC.mm9.masked

Imports Me (3): BSgenome.Mmusculus.UCSC.mm9.masked, musicatk, SPLINTER

Suggests Me (12): ActiveDriverWGS, CAGEr, CAGEWorkflow, chipseq, circRNAprofiler, compEpiTools, EpiCompare, GRaNIE, HiCDCPlus, MEDME, methrix, MMDiff2