qPLEXanalyzer
Tools for quantitative proteomics data analysis
Bioconductor version: 3.23 · Package version: 1.30.0
Tools for TMT based quantitative proteomics data analysis.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("qPLEXanalyzer")Details
| Maintainer | Ashley Sawle <ads2202cu@gmail.com> |
| Author | Matthew Eldridge [aut], Kamal Kishore [aut], Ashley Sawle [aut, cre] |
| License | GPL-2 |
| Bug Reports | https://github.com/crukci-bioinformatics/qPLEXanalyzer/issues |
| Downloads rank | 544 |
| Source branch | RELEASE_3_23 |
| biocViews | DataImport, ImmunoOncology, MassSpectrometry, Normalization, Preprocessing, Proteomics, QualityControl, Software |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | qPLEXanalyzer_1.30.0.tar.gz |
| Windows binary (x86_64) | qPLEXanalyzer_1.30.0.zip |
| macOS binary (arm64) | qPLEXanalyzer_1.30.0.tgz |
| macOS binary (x86_64) | qPLEXanalyzer_1.30.0.tgz |
Dependencies
Depends: R (>= 4.0), Biobase, MSnbase
Imports: assertthat, BiocGenerics, Biostrings, dplyr (>= 1.0.0), ggdendro, ggplot2, graphics, grDevices, IRanges, limma, magrittr, MSnbase, preprocessCore, purrr, RColorBrewer, readr, rlang, scales, stats, stringr, tibble, tidyr, tidyselect, utils
Suggests: patchwork, knitr, MSnbase, qPLEXdata, rmarkdown, statmod, testthat, UniProt.ws, vdiffr
Reverse dependencies
Depends On Me (1): qPLEXdata