iCheck
QC Pipeline and Data Analysis Tools for High-Dimensional Illumina mRNA Expression Data
Bioconductor version: 3.23 · Package version: 1.42.0
QC pipeline and data analysis tools for high-dimensional Illumina mRNA expression data.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("iCheck")Details
| Maintainer | Weiliang Qiu <stwxq@channing.harvard.edu> |
| Author | Weiliang Qiu [aut, cre], Brandon Guo [aut, ctb], Christopher Anderson [aut, ctb], Barbara Klanderman [aut, ctb], Vincent Carey [aut, ctb], Benjamin Raby [aut, ctb] |
| License | GPL (>= 2) |
| Downloads rank | 504 |
| Source branch | RELEASE_3_23 |
| biocViews | DNAMethylation, DifferentialExpression, GeneExpression, Microarray, OneChannel, Preprocessing, QualityControl, Software, TwoChannel |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | iCheck_1.42.0.tar.gz |
| Windows binary (x86_64) | iCheck_1.42.0.zip |
| macOS binary (arm64) | iCheck_1.42.0.tgz |
| macOS binary (x86_64) | iCheck_1.42.0.tgz |
Dependencies
Depends: R (>= 3.2.0), Biobase, lumi, gplots
Imports: stats, graphics, preprocessCore, grDevices, randomForest, affy, limma, parallel, GeneSelectMMD, rgl, MASS, lmtest, scatterplot3d, utils