discordant
The Discordant Method: A Novel Approach for Differential Correlation
Bioconductor version: 3.23 · Package version: 1.36.0
Discordant is an R package that identifies pairs of features that correlate differently between phenotypic groups, with application to -omics data sets. Discordant uses a mixture model that “bins” molecular feature pairs based on their type of coexpression or coabbundance. Algorithm is explained further in "Differential Correlation for Sequencing Data"" (Siska et al. 2016).
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("discordant")Details
| Maintainer | McGrath Max <max.mcgrath@ucdenver.edu> |
| Author | Charlotte Siska [aut], McGrath Max [aut, cre], Katerina Kechris [aut, cph, ths] |
| License | GPL-3 |
| URL | https://github.com/siskac/discordant |
| Downloads rank | 472 |
| Source branch | RELEASE_3_23 |
| biocViews | BiologicalQuestion, Genetics, ImmunoOncology, Microarray, RNASeq, Software, StatisticalMethod, mRNAMicroarray |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | discordant_1.36.0.tar.gz |
| Windows binary (x86_64) | discordant_1.36.0.zip |
| macOS binary (arm64) | discordant_1.36.0.tgz |
| macOS binary (x86_64) | discordant_1.36.0.tgz |