copa
Functions to perform cancer outlier profile analysis.
Bioconductor version: 3.23 · Package version: 1.80.0
COPA is a method to find genes that undergo recurrent fusion in a given cancer type by finding pairs of genes that have mutually exclusive outlier profiles.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("copa")Details
| Maintainer | James W. MacDonald <jmacdon@u.washington.edu> |
| Author | James W. MacDonald |
| License | Artistic-2.0 |
| Downloads rank | 538 |
| Source branch | RELEASE_3_23 |
| biocViews | DifferentialExpression, OneChannel, Software, TwoChannel, Visualization |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | copa_1.80.0.tar.gz |
| Windows binary (x86_64) | copa_1.80.0.zip |
| macOS binary (arm64) | copa_1.80.0.tgz |
| macOS binary (x86_64) | copa_1.80.0.tgz |