TurboNorm
A fast scatterplot smoother suitable for microarray normalization
Bioconductor version: 3.23 · Package version: 1.60.0
A fast scatterplot smoother based on B-splines with second-order difference penalty. Functions for microarray normalization of single-colour data i.e. Affymetrix/Illumina and two-colour data supplied as marray MarrayRaw-objects or limma RGList-objects are available.
Installation
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("TurboNorm")Details
| Maintainer | Maarten van Iterson <mviterson@gmail.com> |
| Author | Maarten van Iterson and Chantal van Leeuwen |
| License | LGPL |
| URL | http://www.humgen.nl/MicroarrayAnalysisGroup.html |
| Downloads rank | 615 |
| Source branch | RELEASE_3_23 |
| biocViews | CpGIsland, DNAMethylation, MethylationArray, Microarray, Normalization, OneChannel, Preprocessing, Software, TwoChannel |
Documentation
Download
Follow the installation instructions to use this package in your R session.
| Source package | TurboNorm_1.60.0.tar.gz |
| Windows binary (x86_64) | TurboNorm_1.60.0.zip |
| macOS binary (arm64) | TurboNorm_1.60.0.tgz |
| macOS binary (x86_64) | TurboNorm_1.60.0.tgz |
Dependencies
Depends: R (>= 2.12.0), convert, limma (>= 1.7.0), marray
Imports: stats, grDevices, affy, lattice
Suggests: BiocStyle, affydata, hgu95av2cdf