SplicingGraphs

Create, manipulate, visualize splicing graphs, and assign RNA-seq reads to them

Bioconductor version: 3.23 · Package version: 1.52.0

This package allows the user to create, manipulate, and visualize splicing graphs and their bubbles based on a gene model for a given organism. Additionally it allows the user to assign RNA-seq reads to the edges of a set of splicing graphs, and to summarize them in different ways.

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("SplicingGraphs")