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NCIgraph

Pathways from the NCI Pathways Database

Bioconductor version: 3.23 · Package version: 1.60.0

Provides various methods to load the pathways from the NCI Pathways Database in R graph objects and to re-format them.

Installation

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("NCIgraph")

Details

MaintainerLaurent Jacob <laurent.jacob@gmail.com>
AuthorLaurent Jacob
LicenseGPL-3
Downloads rank356
Source branchRELEASE_3_23
biocViewsGraphAndNetwork, Pathways, Software

Documentation

Download

Follow the installation instructions to use this package in your R session.

Source packageNCIgraph_1.60.0.tar.gz
Windows binary (x86_64)NCIgraph_1.60.0.zip
macOS binary (arm64)NCIgraph_1.60.0.tgz
macOS binary (x86_64)NCIgraph_1.60.0.tgz
Dependencies

Depends: R (>= 4.0.0)

Imports: graph, KEGGgraph, methods, RBGL, RCy3, R.oo

Suggests: Rgraphviz

Enhances: DEGraph

Reverse dependencies

Imports Me (1): DEGraph

Suggests Me (1): DEGraph