GGdata

DOI: 10.18129/B9.bioc.GGdata    

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.12 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see GGdata.

all 90 hapmap CEU samples, 47K expression, 4mm SNP

Bioconductor version: 3.12

data exemplars dealing with hapmap SNP reports, GWAS, etc.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: VJ Carey <stvjc at channing.harvard.edu>

Installation

To install this package, start R (version "4.0") and enter:

if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("GGdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

PDF		Reference Manual

Details

biocViews	ExperimentData, Genome, HapMap, MicroarrayData, SNPData, SequencingData
Version	1.28.0
License	LGPL
Depends	R (>= 2.12.0), methods, Biobase(>= 2.5.5), GGBase, snpStats, illuminaHumanv1.db, AnnotationDbi
Imports
LinkingTo
Suggests
SystemRequirements
Enhances	GGtools
URL
Depends On Me	eQTL
Imports Me
Suggests Me	crlmm, GGtools
Links To Me
Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package	GGdata_1.28.0.tar.gz
Windows Binary
macOS 10.13 (High Sierra)
Source Repository	git clone https://git.bioconductor.org/packages/GGdata
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/GGdata
Package Short Url	https://bioconductor.org/packages/GGdata/
Package Downloads Report	Download Stats