To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("gaucho")
In most cases, you don't need to download the package archive at all.
Bioconductor version: 2.14
Use genetic algorithms to determine the relationship between clones in heterogenous populations such as cancer sequencing samples
Author: Alex Murison [aut, cre], Christopher Wardell [aut, cre]
Maintainer: Alex Murison <Alexander.Murison at icr.ac.uk>, Christopher Wardell <Christopher.Wardell at icr.ac.uk>
Citation (from within R,
enter citation("gaucho")):
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("gaucho")
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("gaucho")
| R Script | An introduction to gaucho | |
| Reference Manual | ||
| Text | NEWS |
| biocViews | Genetics, SNP, Sequencing, Software, SomaticMutation |
| Version | 1.0.0 |
| In Bioconductor since | BioC 2.14 (R-3.1) |
| License | GPL-3 |
| Depends | R (>= 3.0.0), compiler, GA, graph, heatmap.plus, png, Rgraphviz |
| Imports | |
| Suggests | knitr |
| System Requirements | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Follow Installation instructions to use this package in your R session.
| Package Source | gaucho_1.0.0.tar.gz |
| Windows Binary | gaucho_1.0.0.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | gaucho_1.0.0.tgz |
| Mac OS X 10.9 (Mavericks) | gaucho_1.0.0.tgz |
| Browse/checkout source | (username/password: readonly) |
| Package Downloads Report | Download Stats |
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