To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("Rtreemix")

In most cases, you don't need to download the package archive at all.

Rtreemix

Rtreemix: Mutagenetic trees mixture models.

Bioconductor version: 2.14

Rtreemix is a package that offers an environment for estimating the mutagenetic trees mixture models from cross-sectional data and using them for various predictions. It includes functions for fitting the trees mixture models, likelihood computations, model comparisons, waiting time estimations, stability analysis, etc.

Author: Jasmina Bogojeska

Maintainer: Jasmina Bogojeska <jasmina at mpi-inf.mpg.de>

Citation (from within R, enter citation("Rtreemix")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("Rtreemix")

Documentation

To view documentation for the version of this package installed in your system, start R and enter: 

browseVignettes("Rtreemix")

 

PDF R Script Rtreemix
PDF   Reference Manual

Details

biocViews Software, StatisctialMethod
Version 1.26.0
In Bioconductor since BioC 2.2 (R-2.7)
License LGPL
Depends R (>= 2.5.0), methods, graph, Biobase
Imports methods, graph, Biobase, Hmisc
Suggests Rgraphviz
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source Rtreemix_1.26.0.tar.gz
Windows Binary Rtreemix_1.26.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) Rtreemix_1.26.0.tgz
Mac OS X 10.9 (Mavericks) Rtreemix_1.26.0.tgz
Browse/checkout source (username/password: readonly)
Package Downloads Report Download Stats

Workflows »

Common Bioconductor workflows include:

 

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center

Contact us: support.bioconductor.org

Hosting provided by Fred Hutchinson Cancer Research Center

Copyright © 2003 - 2014