flowClust

Clustering for Flow Cytometry

Bioconductor version: Release (2.12)

Robust model-based clustering using a t-mixture model with Box-Cox transformation. Note: users should have GSL installed. Windows users: 'consult the README file available in the inst directory of the source distribution for necessary configuration instructions'.

Author: Raphael Gottardo <raph at stat.ubc.ca>, Kenneth Lo <c.lo at stat.ubc.ca>, Greg Finak <gfinak at fhcrc.org>

Maintainer: Raphael Gottardo <raph at stat.ubc.ca>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("flowClust")

To cite this package in a publication, start R and enter:

    citation("flowClust")

Documentation

PDF	R Script	flowClust package
PDF		Reference Manual
Text		README
Text		NEWS

Details

biocViews	Bioinformatics, Clustering, FlowCytometry, Software, Visualization
Version	3.0.0
In Bioconductor since	BioC 2.2 (R-2.7)
License	Artistic-2.0
Depends	R(>= 2.5.0), methods, Biobase, graph, RBGL, ellipse, flowViz, mnormt, corpcor, flowCore(>= 1.11.23), clue
Imports	BiocGenerics, MCMCpack
Suggests	parallel
System Requirements
URL
Depends On Me	flowMerge, flowTrans
Imports Me	flowMerge, flowPhyto, flowTrans, flowType
Suggests Me	BiocGenerics

Package Downloads

Package Source	flowClust_3.0.0.tar.gz
Windows Binary	flowClust_3.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	flowClust_3.0.0.tgz
Package Downloads Report	Download Stats

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