RCytoscape

Display and manipulate graphs in Cytoscape

Bioconductor version: Release (2.12)

Interactvive viewing and exploration of graphs, connecting R to Cytoscape.

Author: Paul Shannon

Maintainer: Paul Shannon <pshannon at systemsbiology.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("RCytoscape")

To cite this package in a publication, start R and enter:

    citation("RCytoscape")

biocViews	ConnectTools, GraphsAndNetworks, NetworkVisualization, Software
Version	1.10.0
In Bioconductor since	BioC 2.7 (R-2.12)
License	GPL-2
Depends	R (>= 2.14.0), graph(>= 1.31.0), XMLRPC (>= 0.2.4)
Imports	methods, XMLRPC, BiocGenerics
Suggests	RUnit
System Requirements
URL	http://rcytoscape.systemsbiology.net
Depends On Me
Imports Me	categoryCompare, NCIgraph, RamiGO
Suggests Me	clipper, GeneNetworkBuilder, graphite

Common Bioconductor workflows include:

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