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gwascat
representing and modeling data in the NHGRI GWAS catalog
Bioconductor version: 2.10
representing and modeling data in the NHGRI GWAS catalog
Author: VJ Carey <stvjc at channing.harvard.edu>
Maintainer: VJ Carey <stvjc at channing.harvard.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("gwascat")
To cite this package in a publication, start R and enter:
citation("gwascat")
Documentation
| R Script | gwascat -- exploring NHGRI GWAS catalog | |
| Reference Manual |
Details
| biocViews | Software |
| Depends | R (>= 2.14.0), methods, IRanges, GenomicRanges, snpStats, graph |
| Imports | Biostrings |
| Suggests | DO.db |
| System Requirements | |
| License | Artistic-2.0 |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.0.0 |
| Since | Bioconductor 2.10 (R-2.15) |
Package Downloads
| Package Source | gwascat_1.0.0.tar.gz |
| Windows Binary | gwascat_1.0.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | gwascat_1.0.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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